.. _configuration: ************* Configuration ************* Configuring a run with S3 data ------------------------------ As a standalone application, PyActiveStorage does not need any configuration, data being supplied directly to the ``Active`` class; however, some configuration is still needed to be able to access an S3 bucket. For an example, suppose we are trying to access a file ``ch330a.pc19790301-def.nc`` on CEDA-JASMIN's S3 storage, for which one needs to supply ``Active`` the ``storage_options`` dictionary: .. code-block:: bash storage_options = { 'key': "key.string", 'secret': "sercret.string", 'client_kwargs': {'endpoint_url': "https://uor-aces-o.s3-ext.jc.rl.ac.uk"}, } where ``key.string`` and ``secret.string`` are the key and secret strings needed to access the ``S3_BUCKET`` S3 bucket. Then, the call to ``Active`` is: .. code-block:: bash active = Active("S3_BUCKET/ch330a.pc19790301-def.nc", ncvar='UM_m01s16i202_vn1106', storage_options=storage_options, active_storage_url="https://reductionist.jasmin.ac.uk/") Note that the ``_ specified here is the Reductionist server deployed on CEDA-JASMIN. Configuring a Reductionist deployment ------------------------------------- A few points on how to deploy `Reductionist `_ on a Rocky9 cloud machine: * 99% of the deployment documentation is found in `Reductionist's nice deployment instructions `_ * there are a few caveats specific to a pristine Rocky9 (and other distros) deployment though: * (n00b step) always have a system ``pip`` by installing it with: ``python -m ensurepip --upgrade`` * system Python executable is ``python3`` - you can, of course, ``ln -s`` it to ``python``, or, better, run Ansible pointing it to the correct system Python3: .. code-block:: bash ansible-playbook -i reductionist-rs/deployment/inventory reductionist-rs/deployment/site.yml -e 'ansible_python_interpreter=/usr/bin/python3' * that call *may result* (as in our case) in an error: .. code-block:: bash TASK [Ensure step RPM is installed] **************************************************************************************************** fatal: [localhost]: FAILED! => {"changed": false, "msg": "Failed to validate GPG signature for step-cli-0.24.4-1.x86_64: Package step-cli_0.24.4_amd643z16ickc.rpm is not signed"} that's because, in our case, we missed the ``step-cli`` package, and a ``dfn`` install is not well liked by the system (it's not ``mamba`` business); that gets sorted out via `Step's install docs `_: .. code-block:: bash wget https://dl.smallstep.com/cli/docs-cli-install/latest/step-cli_amd64.rpm sudo rpm -i step-cli_amd64.rpm